dc.contributor | Facultad de Ciencias Biologicas y Ambientales | es_ES |
dc.contributor.author | Gallego Clemente, Elena | |
dc.contributor.author | Moreno González, Víctor | |
dc.contributor.author | Ibáñez Sánchez, Ana María | |
dc.contributor.author | Calvo Peña, Carla | |
dc.contributor.author | Ghoreshizadeh, Seyedehtannaz | |
dc.contributor.author | Radišek, Sebastjan | |
dc.contributor.author | Cobos Román, Rebeca | |
dc.contributor.author | Rubio Coque, Juan José | |
dc.contributor.other | Microbiologia | es_ES |
dc.date | 2023 | |
dc.date.accessioned | 2024-03-21T07:44:28Z | |
dc.date.available | 2024-03-21T07:44:28Z | |
dc.identifier.citation | Gallego-Clemente, E., Moreno-González, V., Ibáñez, A., Calvo-Peña, C., Ghoreshizadeh, S., Radišek, S., Cobos, R., & Coque, J. J. R. (2023). Changes in the microbial composition of the rhizosphere of hop plants affected by Verticillium wilt caused by Verticillium nonalfalfae. Microorganisms, 11(7), Article e1819. https://doi.org/10.3390/microorganisms11071819 | es_ES |
dc.identifier.other | https://www.mdpi.com/2076-2607/11/7/1819 | es_ES |
dc.identifier.uri | https://hdl.handle.net/10612/19183 | |
dc.description | This article belongs to the Special Issue Plant Root Interaction with Associated Microbiomes | es_ES |
dc.description.abstract | [EN] Verticillium wilt is a devastating disease affecting many crops, including hops. This study aims to describe fungal and bacterial populations associated with bulk and rhizosphere soils in a hop field cultivated in Slovenia with the Celeia variety, which is highly susceptible to Verticillium nonalfalfae. As both healthy and diseased plants coexist in the same field, we focused this study on the detection of putative differences in the microbial communities associated with the two types of plants. Bacterial communities were characterized by sequencing the V4 region of the 16S rRNA gene, whereas sequencing of the ITS2 region was performed for fungal communities. The bacterial community was dominated by phyla Proteobacteria, Acidobacteriota, Bacteroidota, Actinobacteriota, Planctomycetota, Chloroflexi, Gemmatimonadota, and Verrucomicrobiota, which are typically found in crop soils throughout the world. At a fungal level, Fusarium sp. was the dominant taxon in both bulk and rhizosphere soils. Verticillium sp. levels were very low in all samples analyzed and could only be detected by qPCR in the rhizosphere of diseased plants. The rhizosphere of diseased plants underwent important changes with respect to the rhizosphere of healthy plants where significant increases in potentially beneficial fungi such as the basidiomycetes Ceratobasidium sp. and Mycena sp., the zygomycete Mortierella sp., and a member of Glomeralles were observed. However, the rhizosphere of diseased plants experienced a decrease in pathogenic basidiomycetes that can affect the root system, such as Thanatephorus cucumeris (the teleomorph of Rhizoctonia solani) and Calyptella sp | es_ES |
dc.language | eng | es_ES |
dc.publisher | MDPI | es_ES |
dc.rights.uri | https://creativecommons.org/licenses/by/4.0/ | |
dc.subject | Biología | es_ES |
dc.subject | Biotecnología | es_ES |
dc.subject | Ingeniería agrícola | es_ES |
dc.subject.other | Hop | es_ES |
dc.subject.other | Verticillium wilt | es_ES |
dc.subject.other | Soil | es_ES |
dc.subject.other | Rhizosphere | es_ES |
dc.subject.other | Bacterial populations | es_ES |
dc.subject.other | Fungal populations | es_ES |
dc.subject.other | Metataxonomy | es_ES |
dc.title | Changes in the Microbial Composition of the Rhizosphere of Hop Plants Affected by Verticillium Wilt Caused by Verticillium nonalfalfae | es_ES |
dc.type | info:eu-repo/semantics/article | es_ES |
dc.identifier.doi | 10.3390/microorganisms11071819 | |
dc.description.peerreviewed | SI | es_ES |
dc.relation.projectID | info:eu-repo/grant/AIE/Programa Estatal para Afrontar las Prioridades de Nuestro Entorno/PCI2022-132966/ES/Development of eco-sustainable systemic technologies and strategies in key mediterranean crops systems, contributing the small farming socio-economic resilience/SUSTEMICROP | es_ES |
dc.rights.accessRights | info:eu-repo/semantics/openAccess | es_ES |
dc.identifier.essn | 2076-2607 | |
dc.journal.title | Microorganisms | es_ES |
dc.volume.number | 11 | es_ES |
dc.issue.number | 7 | es_ES |
dc.page.initial | 1819 | es_ES |
dc.type.hasVersion | info:eu-repo/semantics/publishedVersion | es_ES |
dc.subject.unesco | 3108 Fitopatología | es_ES |
dc.subject.unesco | 2511.09 Microbiología de Suelos | es_ES |
dc.rights.license | Attribution 4.0 International | |
dc.description.project | This work was financed through a PRIMA grant (Section 2-2021) and is part of the project PCI2022-132966, funded by the Ministry of Science and Innovation (MCIN), the State Investigation Agency (MCIN/AEI/10.13039/501100011033), and by the European Union “NextGenerationEU”/Recovery Plant, Transformation and Resilience (PRTR). Carla Calvo-Peña was supported by a predoctoral contract from the Junta de Castilla y León (Consejería de Educación) and the European Social Fund. Ana Ibañez was supported by a “Margarita Salas” modality postdoctoral grant (Reference no.: UP2021-025) through the University of León awarded by the Spanish Ministry of Universities within the Recovery, Transformation, and Resilience Plan (modernization and digitalization of the educational system), for which funding comes from the European Recovery Instrument European Union—NextGenerationEU | es_ES |