RT info:eu-repo/semantics/article T1 Infectious abortions in small domestic ruminants in the Iberian Peninsula: Optimization of sampling procedures for molecular diagnostics T2 Abortos infecciosos en pequeños rumiantes domésticos de la Península Ibérica: Optimización de los procedimientos de muestreo para el diagnóstico molecular A1 Alzuguren, Oihane A1 Domínguez, Lara A1 Chacón, Gema A1 Benito Zúñiga, Alfredo Ángel A1 Mencía-Ares, Óscar A2 Sanidad Animal K1 Sanidad animal K1 Veterinaria K1 Chlamydia abortus K1 Coxiella burnetii K1 placental swab K1 qPCR K1 Abortifacient pathogen K1 Fetal tongue K1 Goat K1 Sheep K1 Placental swab K1 3109 Ciencias Veterinarias K1 3109 AB [EN] Introduction: Infectious abortions have a major impact on small domestic ruminant farms, i.e., sheep and goats, both in terms of profitability and health status. Therefore, rapid and sensitive diagnosis is essential to minimize losses. Currently, molecular techniques, such as qPCR, are routinely used for their diagnosis, which imply the need to manipulate all abortive material, with consequent biosafety risks. Here, we evaluate the frequency of the main abortifacient pathogens in small domestic ruminants in the Iberian Peninsula and also assess an alternative approach for the optimization of sampling for molecular diagnosis. Results: A total of 392 clinical cases were analyzed from April 2020 to May 2021, evidencing that the main causative agents of abortion detected were Coxiella burnetii (49.0%), Chlamydia abortus (38.3%) and, to a lesser extent, Toxoplasma gondii (10.2%), Salmonella enterica (7.1%) and Campylobacter spp. (6.1%). An uneven distribution of these pathogens was observed between ruminant species, with a higher frequency (p < 0.05) of T. gondii, S. enterica and Campylobacter spp. in sheep than goat abortions, and among geographic areas, highlighting the higher frequency (p < 0.05) of T. gondii and Campylobacter spp. in the north compared to southeastern Spain. The alternative sampling method, consisting on the use of fetal tongues and placental swabs in replacement of the whole fetus and placental tissue, offered a very good agreement with the classical method for all pathogens, except for low concentrations of C. burnetii, which seems to have a doubtful role in abortion when its concentration in the abortifacient material is low. Conclusions: This study reveals a high frequency of infectious etiology in abortions of small domestic ruminants in the Iberian Peninsula and validates for the first time an alternative sampling method for molecular diagnosis that will help to provide rapid and accurate results while minimizing biosafety risks. PB Frontiers Media SA SN 2297-1769 LK https://hdl.handle.net/10612/17743 UL https://hdl.handle.net/10612/17743 NO Alzuguren, O., Domínguez, L., Chacón, G., Benito, A. A., & Mencía-Ares, O. (2023). Infectious abortions in small domestic ruminants in the Iberian Peninsula: Optimization of sampling procedures for molecular diagnostics. Frontiers in Veterinary Science, 10, 1152289. DS BULERIA. Repositorio Institucional de la Universidad de León RD 02-jun-2024